STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bathy10g04120Uncharacterized protein. (1277 aa)    
Predicted Functional Partners:
Bathy02g05010
Ubiquitin-like domain-containing protein.
    
  0.652
Bathy08g01930
Ubiquitin.
    
  0.492
Bathy15g01410
Ubiquitin-like domain-containing protein.
    
  0.492
Bathy10g04000
Peptidase_S9 domain-containing protein.
    
 
 0.437
Bathy13g00240
Cathepsin D (Lysosomal aspartyl protease); Belongs to the peptidase A1 family.
     
 0.413
Bathy09g00810
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
     
 0.413
Bathy08g04140
Uncharacterized protein.
    
  0.408
Bathy02g03670
Ubiquitin-like domain-containing protein.
    
  0.408
Bathy07g03600
Polyubiquitin.
    
  0.408
Bathy13g00760
Sde2_N_Ubi domain-containing protein.
    
  0.408
Your Current Organism:
Bathycoccus prasinos
NCBI taxonomy Id: 41875
Other names: B. prasinos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.