STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bathy12g030003'-5' exonuclease domain-containing protein. (686 aa)    
Predicted Functional Partners:
Bathy01g03760
Uncharacterized protein.
   
    0.463
Bathy06g04620
Histone chaperone asf1.
   
    0.459
Bathy05g04480
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.452
Bathy16g01120
Uncharacterized protein.
   
    0.452
Bathy04g00270
WD_REPEATS_REGION domain-containing protein.
   
    0.450
Bathy09g04070
Structural maintenance of chromosomes protein.
   
    0.445
Your Current Organism:
Bathycoccus prasinos
NCBI taxonomy Id: 41875
Other names: B. prasinos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.