STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bathy08g03290PUM-HD domain-containing protein. (778 aa)    
Predicted Functional Partners:
Caf1
Caf1 CCR4-associated (Transcription) factor 1.
    
 
 0.830
Bathy15g00200
Cytochrome c oxidase copper chaperone.
    
 
 0.794
Bathy05g01950
Uncharacterized protein.
   
 
 0.630
Bathy18g01510
PUM-HD domain-containing protein.
    
 
0.596
Bathy17g00450
Uncharacterized protein.
   
   0.564
Bathy16g02270
ACB domain-containing protein.
   
   0.564
Bathy07g00230
ACB domain-containing protein.
   
   0.564
Bathy03g03500
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
      
 0.559
Bathy13g02270
HIG1 domain-containing protein.
    
   0.530
Bathy04g01400
AD domain-containing protein.
    
   0.519
Your Current Organism:
Bathycoccus prasinos
NCBI taxonomy Id: 41875
Other names: B. prasinos
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