STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bathy11g00430RNA helicase. (594 aa)    
Predicted Functional Partners:
BOP1
Ribosome biogenesis protein BOP1.
   
 0.958
Bathy03g03440
Ribosomal biogenesis protein Gar2.
   
 
 0.924
Bathy15g02100
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.922
Bathy03g05620
Uncharacterized protein.
   
 
 0.914
Bathy06g02300
Nop domain-containing protein.
  
 
 0.910
Bathy08g01980
Uncharacterized protein.
   
 
 0.904
Bathy03g04950
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 0.891
Bathy06g01340
RL10P_insert domain-containing protein.
   
 
 0.889
Bathy09g02790
Ribosome biogenesis protein BRX1 homolog.
   
 
 0.887
Bathy07g02980
Uncharacterized protein.
   
 0.885
Your Current Organism:
Bathycoccus prasinos
NCBI taxonomy Id: 41875
Other names: B. prasinos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.