STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bathy09g0345060S ribosomal protein L39. (107 aa)    
Predicted Functional Partners:
Bathy02g00840
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.999
Bathy03g00190
60S ribosomal protein L27.
   
 0.999
Bathy04g00450
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.999
Bathy04g03440
Ribosomal protein L37; Binds to the 23S rRNA.
   
 0.999
Bathy05g01580
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.999
Bathy06g02010
60S ribosomal protein L30.
   
 0.999
Bathy11g02110
Uncharacterized protein.
   
 0.999
Bathy13g01180
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
Bathy14g01490
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.999
RPL36
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.999
Your Current Organism:
Bathycoccus prasinos
NCBI taxonomy Id: 41875
Other names: B. prasinos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.