Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bathy02g03510 | Bathy03g01240 | K8EAJ9 | K8F1R8 | RNA_pol_L_2 domain-containing protein. | DNA-directed RNA polymerases I. | 0.999 |
Bathy02g03510 | Bathy08g04520 | K8EAJ9 | K8EYU3 | RNA_pol_L_2 domain-containing protein. | DNA-directed RNA polymerases I, II, and III subunit RPABC1. | 0.999 |
Bathy02g03510 | Bathy10g04100 | K8EAJ9 | K8F8T8 | RNA_pol_L_2 domain-containing protein. | RPOL4c domain-containing protein. | 0.999 |
Bathy02g03510 | Bathy11g01180 | K8EAJ9 | K8EK71 | RNA_pol_L_2 domain-containing protein. | Uncharacterized protein. | 0.999 |
Bathy02g03510 | Bathy11g01290 | K8EAJ9 | K8EKS8 | RNA_pol_L_2 domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
Bathy02g03510 | Bathy11g01880 | K8EAJ9 | K8FA86 | RNA_pol_L_2 domain-containing protein. | Uncharacterized protein. | 0.999 |
Bathy02g03510 | Bathy14g02490 | K8EAJ9 | K8F4F7 | RNA_pol_L_2 domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
Bathy02g03510 | Bathy14g02500 | K8EAJ9 | K8ENU1 | RNA_pol_L_2 domain-containing protein. | Uncharacterized protein. | 0.999 |
Bathy02g03510 | Bathy14g02800 | K8EAJ9 | K8ENH8 | RNA_pol_L_2 domain-containing protein. | DNA-directed RNA polymerase II subunit RPB3. | 0.999 |
Bathy02g03510 | Bathy18g01200 | K8EAJ9 | K8ER33 | RNA_pol_L_2 domain-containing protein. | Uncharacterized protein. | 0.999 |
Bathy03g01240 | Bathy02g03510 | K8F1R8 | K8EAJ9 | DNA-directed RNA polymerases I. | RNA_pol_L_2 domain-containing protein. | 0.999 |
Bathy03g01240 | Bathy08g04520 | K8F1R8 | K8EYU3 | DNA-directed RNA polymerases I. | DNA-directed RNA polymerases I, II, and III subunit RPABC1. | 0.999 |
Bathy03g01240 | Bathy10g04100 | K8F1R8 | K8F8T8 | DNA-directed RNA polymerases I. | RPOL4c domain-containing protein. | 0.999 |
Bathy03g01240 | Bathy11g01180 | K8F1R8 | K8EK71 | DNA-directed RNA polymerases I. | Uncharacterized protein. | 0.999 |
Bathy03g01240 | Bathy11g01290 | K8F1R8 | K8EKS8 | DNA-directed RNA polymerases I. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
Bathy03g01240 | Bathy11g01880 | K8F1R8 | K8FA86 | DNA-directed RNA polymerases I. | Uncharacterized protein. | 0.999 |
Bathy03g01240 | Bathy14g02490 | K8F1R8 | K8F4F7 | DNA-directed RNA polymerases I. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
Bathy03g01240 | Bathy14g02500 | K8F1R8 | K8ENU1 | DNA-directed RNA polymerases I. | Uncharacterized protein. | 0.999 |
Bathy03g01240 | Bathy14g02800 | K8F1R8 | K8ENH8 | DNA-directed RNA polymerases I. | DNA-directed RNA polymerase II subunit RPB3. | 0.999 |
Bathy03g01240 | Bathy18g01200 | K8F1R8 | K8ER33 | DNA-directed RNA polymerases I. | Uncharacterized protein. | 0.999 |
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