STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bathy18g00110Importin N-terminal domain-containing protein. (884 aa)    
Predicted Functional Partners:
Bathy10g01060
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.999
Bathy17g00870
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.991
Bathy11g02250
RanBD1 domain-containing protein.
   
 0.983
Bathy08g02320
Uncharacterized protein.
    
 0.976
Bathy03g02450
PPIase cyclophilin-type domain-containing protein.
   
 0.972
Bathy08g02140
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.941
Bathy09g04700
Exosome component 10.
    
   0.941
Bathy16g02250
Importin N-terminal domain-containing protein.
   
 
 0.898
Bathy15g01160
Nup54 domain-containing protein.
   
 0.792
Bathy12g03480
Nuclear cap-binding protein subunit 2.
   
   0.748
Your Current Organism:
Bathycoccus prasinos
NCBI taxonomy Id: 41875
Other names: B. prasinos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.