C7M61_004902 protein (Candida pseudohaemulonis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C7M61_004902

Uncharacterized protein. (420 aa)

Predicted Functional Partners:

C7M61_000142

0.668

C7M61_004650

0.660

C7M61_000675

0.591

C7M61_004281

0.541

C7M61_003515

0.541

C7M61_000253

0.520

C7M61_003606

0.474

C7M61_001631

0.472

C7M61_000029

0.472

Your Current Organism:

Candida pseudohaemulonis

NCBI taxonomy Id: 418784
Other names: CBS 10004, Candida pseudohaemulonii, DMST 17134, JCM 12453, M9987, [. pseudohaemulonis, [Candida] pseudohaemulonis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C7M61_000029	C7M61_000142	A0A2P7YWR7	A0A2P7YX01	Uncharacterized protein.	Uncharacterized protein.	0.602
C7M61_000029	C7M61_000253	A0A2P7YWR7	A0A2P7YXB5	Uncharacterized protein.	AAA domain-containing protein.	0.464
C7M61_000029	C7M61_000675	A0A2P7YWR7	A0A2P7YYH2	Uncharacterized protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.602
C7M61_000029	C7M61_001631	A0A2P7YWR7	A0A2P7YV29	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.414
C7M61_000029	C7M61_003515	A0A2P7YWR7	A0A2P7YM95	Uncharacterized protein.	Polyubiquitin.	0.957
C7M61_000029	C7M61_003606	A0A2P7YWR7	A0A2P7YMK4	Uncharacterized protein.	UV excision repair protein Rad23.	0.898
C7M61_000029	C7M61_004281	A0A2P7YWR7	A0A2P7YIL0	Uncharacterized protein.	AN1-type domain-containing protein.	0.901
C7M61_000029	C7M61_004650	A0A2P7YWR7	A0A2P7YHF6	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.930
C7M61_000029	C7M61_004902	A0A2P7YWR7	A0A2P7YFG9	Uncharacterized protein.	Uncharacterized protein.	0.472
C7M61_000142	C7M61_000029	A0A2P7YX01	A0A2P7YWR7	Uncharacterized protein.	Uncharacterized protein.	0.602
C7M61_000142	C7M61_000253	A0A2P7YX01	A0A2P7YXB5	Uncharacterized protein.	AAA domain-containing protein.	0.673
C7M61_000142	C7M61_000675	A0A2P7YX01	A0A2P7YYH2	Uncharacterized protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.976
C7M61_000142	C7M61_001631	A0A2P7YX01	A0A2P7YV29	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.602
C7M61_000142	C7M61_003515	A0A2P7YX01	A0A2P7YM95	Uncharacterized protein.	Polyubiquitin.	0.914
C7M61_000142	C7M61_003606	A0A2P7YX01	A0A2P7YMK4	Uncharacterized protein.	UV excision repair protein Rad23.	0.602
C7M61_000142	C7M61_004281	A0A2P7YX01	A0A2P7YIL0	Uncharacterized protein.	AN1-type domain-containing protein.	0.816
C7M61_000142	C7M61_004650	A0A2P7YX01	A0A2P7YHF6	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.894
C7M61_000142	C7M61_004902	A0A2P7YX01	A0A2P7YFG9	Uncharacterized protein.	Uncharacterized protein.	0.668
C7M61_000253	C7M61_000029	A0A2P7YXB5	A0A2P7YWR7	AAA domain-containing protein.	Uncharacterized protein.	0.464
C7M61_000253	C7M61_000142	A0A2P7YXB5	A0A2P7YX01	AAA domain-containing protein.	Uncharacterized protein.	0.673