STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M61_004941Rab-GAP TBC domain-containing protein. (493 aa)    
Predicted Functional Partners:
C7M61_000932
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.935
C7M61_000602
Uncharacterized protein.
   
 
 0.746
C7M61_000280
Uncharacterized protein.
   
 
 0.711
C7M61_003312
Uncharacterized protein.
   
 
 0.615
C7M61_001270
Uncharacterized protein.
      
 0.455
C7M61_002316
Rab-GAP TBC domain-containing protein.
    
 
 0.441
C7M61_003995
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.427
Your Current Organism:
Candida pseudohaemulonis
NCBI taxonomy Id: 418784
Other names: CBS 10004, Candida pseudohaemulonii, DMST 17134, JCM 12453, M9987, [. pseudohaemulonis, [Candida] pseudohaemulonis
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