STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M61_004227Nitrogen regulatory protein DAL80. (560 aa)    
Predicted Functional Partners:
C7M61_002376
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 0.844
C7M61_000061
Fork-head domain-containing protein.
  
 
 0.643
C7M61_005128
HMG box domain-containing protein.
  
 
 0.624
C7M61_003929
Homeobox domain-containing protein.
    
 0.581
C7M61_002466
Uncharacterized protein.
    
 0.581
C7M61_005080
Histone acetyltransferase GCN5.
    
  0.558
C7M61_002648
TATA-box-binding protein.
   
 0.555
C7M61_002712
Uncharacterized protein.
    
 0.551
C7M61_000587
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.546
C7M61_003546
BZIP domain-containing protein.
    
 0.544
Your Current Organism:
Candida pseudohaemulonis
NCBI taxonomy Id: 418784
Other names: CBS 10004, Candida pseudohaemulonii, DMST 17134, JCM 12453, M9987, [. pseudohaemulonis, [Candida] pseudohaemulonis
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