STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M61_002990Uncharacterized protein. (440 aa)    
Predicted Functional Partners:
C7M61_001519
Uncharacterized protein.
   
 
 0.816
C7M61_000260
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.812
C7M61_002765
Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.801
C7M61_004377
Uncharacterized protein.
   
 
 0.791
C7M61_000314
Uncharacterized protein.
   
 
 0.791
C7M61_003778
Ribosomal protein L2.
   
   0.789
C7M61_003178
MRP-L46 domain-containing protein.
   
 
 0.785
C7M61_001277
RNase III domain-containing protein.
   
 
 0.784
C7M61_001586
Ribosomal protein L27.
   
 
 0.783
C7M61_000047
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.782
Your Current Organism:
Candida pseudohaemulonis
NCBI taxonomy Id: 418784
Other names: CBS 10004, Candida pseudohaemulonii, DMST 17134, JCM 12453, M9987, [. pseudohaemulonis, [Candida] pseudohaemulonis
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