STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO01112.1Glycerate 2-kinase. (431 aa)    
Predicted Functional Partners:
SDO01190.1
Pyruvate kinase.
 
 
 0.917
SDO03969.1
Glyoxylate reductase.
 
 0.816
SDP61610.1
Enolase.
   
 0.810
SDP17318.1
Lactate dehydrogenase.
 
 0.787
SDO72688.1
Glucose-6-phosphate isomerase.
 
  
 0.781
SDO79193.1
Lactate dehydrogenase.
 
 0.773
SDO74593.1
Pyruvate phosphate dikinase.
    
  0.742
SDP25636.1
Triosephosphate isomerase.
  
  
 0.738
SDO70398.1
Glyceraldehyde 3-phosphate dehydrogenase.
   
 
  0.697
SDO70440.1
Fructose-bisphosphate aldolase, class I.
   
 
  0.696
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.