STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO02982.1Vanillate O-demethylase ferredoxin subunit. (342 aa)    
Predicted Functional Partners:
SDO95322.1
Formate dehydrogenase.
  
 0.996
SDO26155.1
NAD(P)H-dependent nitrite reductase flavoprotein subunit.
 
 0.995
SDP23763.1
NADH-quinone oxidoreductase subunit I.
  
 0.990
SDO01577.1
Glutamate synthase (NADPH/NADH) small chain.
   
 0.985
SDP21003.1
NADH dehydrogenase subunit B.
  
  0.984
SDP21129.1
NADH-quinone oxidoreductase subunit D.
  
 0.983
SDP21038.1
NADH dehydrogenase subunit C.
  
 0.980
SDP23971.1
NADH dehydrogenase subunit N.
    
 0.978
SDP23727.1
NADH dehydrogenase subunit H.
  
 0.974
SDO02933.1
Vanillate O-demethylase monooxygenase subunit.
 
 
 0.973
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.