STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO03514.1Cyanate lyase. (146 aa)    
Predicted Functional Partners:
SDO39804.1
Carbonic anhydrase.
  
 
 0.900
SDO03432.1
Nitrate/nitrite transport system permease protein.
 
     0.849
SDO03474.1
Nitrate/nitrite transport system ATP-binding protein.
 
     0.837
SDO03553.1
Hypothetical protein.
       0.599
SDP08708.1
Adenine phosphoribosyltransferase.
     
 0.547
SDO78016.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
     
  0.499
SDO03376.1
PAS domain S-box-containing protein.
 
     0.466
SDO43723.1
Molybdate transporter of MFS superfamily protein.
     
 0.427
SDP11640.1
Sulfate permease, SulP family.
     
 0.427
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.