STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO07841.1Cytochrome P450. (472 aa)    
Predicted Functional Partners:
SDP65298.1
Large subunit ribosomal protein L6.
    
  0.979
SDO02169.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
  
 0.978
SDP21644.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
  
 0.978
SDP07175.1
Methanesulfonate monooxygenase reductase component.
  
 0.972
SDO14941.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
  
 
 0.964
SDO02982.1
Vanillate O-demethylase ferredoxin subunit.
  
 0.962
SDO26155.1
NAD(P)H-dependent nitrite reductase flavoprotein subunit.
 
  
 0.953
SDO24215.1
DNA polymerase I.
    
 0.943
SDO25616.1
UDP:flavonoid glycosyltransferase YjiC, YdhE family.
  
 0.923
SDO73159.1
fatty-acyl-CoA synthase.
   
 0.921
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.