STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO08083.1Bacterioferritin. (161 aa)    
Predicted Functional Partners:
SDO08041.1
BFD-like [2Fe-2S] binding domain-containing protein.
  
 
 0.943
SDO26186.1
Assimilatory nitrate reductase catalytic subunit.
  
 
 0.911
SDO01986.1
Ferrochelatase.
     
 0.786
SDO08158.1
Hypothetical protein.
 
     0.753
SDO03295.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
   
 
 0.729
SDO08117.1
Hypothetical protein.
 
     0.711
SDO08321.1
Heme-degrading monooxygenase HmoA.
     
 0.526
SDO07997.1
Hypothetical protein.
       0.449
SDO07920.1
Putative iron-regulated protein.
 
     0.434
SDO32331.1
Rubrerythrin.
    
 0.425
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.