STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO09839.1HSP20 family protein. (162 aa)    
Predicted Functional Partners:
SDO71238.1
Chaperonin GroEL.
   
 
 0.833
SDP08073.1
Chaperonin GroEL.
   
 
 0.833
SDO33834.1
ATP-dependent Clp protease ATP-binding subunit ClpB.
 
 
 0.775
SDO69500.1
Membrane protease FtsH catalytic subunit.
  
 
 0.771
SDO11364.1
UDP-glucose 4-epimerase.
  
 
  0.761
SDO01506.1
Molecular chaperone IbpA.
  
  
 0.732
SDP63925.1
SPW repeat-containing protein.
  
 
  0.731
SDO66104.1
ATP-dependent Clp protease ATP-binding subunit ClpA.
 
 
 0.724
SDO03853.1
UDP-glucuronate 4-epimerase.
   
 
  0.722
SDO21671.1
Nucleoside-diphosphate-sugar epimerase.
   
 
  0.722
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.