STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO10890.1UDP-N-acetylglucosamine 1-carboxyvinyltransferase. (430 aa)    
Predicted Functional Partners:
SDO80713.1
UDP-N-acetylmuramate dehydrogenase.
 
  
 0.944
SDO80749.1
UDP-N-acetylmuramate--L-alanine ligase.
 
  
 0.873
SDP50996.1
Bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase.
 
 
 0.869
SDO80912.1
Phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
  
 0.858
SDP25109.1
acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase.
  
 
 0.848
SDO80841.1
Cell division protein FtsW.
 
  
 0.843
SDO80808.1
UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase.
 
   
 0.839
SDO80988.1
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
 
   
 0.836
SDO81026.1
Cell division protein FtsI (penicillin-binding protein 3).
 
   
 0.815
SDO80952.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase.
 
   
 0.804
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.