STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO11600.1Undecaprenyl-phosphate glucose phosphotransferase. (487 aa)    
Predicted Functional Partners:
SDP17576.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.976
SDO42000.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase.
  
 
 0.965
SDO11682.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase.
  
 0.962
SDO79236.1
Chain length determinant protein.
  
 
 0.956
SDP17543.1
Polysaccharide export outer membrane protein.
 
 
 0.842
SDO10448.1
SLBB domain-containing protein.
 
 
 0.809
SDO11626.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.780
SDO11398.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 0.769
SDO91996.1
Methyltransferase, FkbM family.
 
  
 0.718
SDO30376.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.713
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.