STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO13735.1(S)-sulfolactate dehydrogenase. (314 aa)    
Predicted Functional Partners:
SDO69309.1
Phosphoserine aminotransferase apoenzyme.
 
 0.988
SDO13797.1
(2R)-3-sulfolactate dehydrogenase (NADP+).
  
 0.933
SDP65298.1
Large subunit ribosomal protein L6.
    
   0.840
SDO13699.1
L-alanine-DL-glutamate epimerase.
 
     0.805
SDO13635.1
Putative tricarboxylic transport membrane protein.
       0.773
SDO13668.1
Putative tricarboxylic transport membrane protein.
       0.773
SDO80335.1
Acetoin utilization deacetylase AcuC.
  
 0.758
SDO73907.1
Acetoin utilization deacetylase AcuC.
    
 0.755
SDP49678.1
Threonine dehydratase.
  
 
 0.738
SDP65076.1
LSU ribosomal protein L2P.
    
   0.725
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.