STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO16105.1Dihydroorotate oxidase A. (363 aa)    
Predicted Functional Partners:
SDP07175.1
Methanesulfonate monooxygenase reductase component.
  
 0.999
SDO35915.1
Orotate phosphoribosyltransferase.
  
 0.995
SDP28826.1
Carbamoyl-phosphate synthase large subunit.
 
 0.991
SDO65236.1
Aspartate carbamoyltransferase.
 
 
 0.986
SDP59187.1
Orotidine-5'-phosphate decarboxylase.
  
 
 0.985
SDO65261.1
Dihydroorotase.
 
 0.980
SDO73348.1
Dihydroorotase.
  
 0.978
SDP28725.1
Carbamoyl-phosphate synthase small subunit.
 
  
 0.966
SDO22939.1
phenylalanyl-tRNA synthetase beta subunit.
  
  
 0.958
SDO78313.1
IMP dehydrogenase.
 
 0.889
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.