STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO19016.1Urease subunit gamma/beta. (208 aa)    
Predicted Functional Partners:
SDO18837.1
Urease accessory protein.
  
 0.999
SDO18892.1
Urease accessory protein.
 
 
 0.999
SDO18925.1
Urease accessory protein.
 
  
 0.999
SDO18963.1
Urease subunit alpha.
 0.999
SDO19055.1
Urease accessory protein.
 
 
 0.999
SDP61918.1
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
    
   0.935
SDP49854.1
Agmatinase.
 
  
  0.924
SDO09027.1
Sensor histidine kinase inhibitor, KipI family.
     
 0.902
SDO08991.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
     
 0.898
SDO77157.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
     
 0.885
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.