STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO19259.1Amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-). (431 aa)    
Predicted Functional Partners:
SDO19171.1
Urea transport system permease protein.
 
 
 0.998
SDO19216.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family.
 
 
 0.998
SDO19131.1
Urea transport system ATP-binding protein.
 
  
 0.997
SDO19089.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-).
 
 
 0.972
SDO25938.1
Response regulator receiver and ANTAR domain protein.
  
 
 0.868
SDP62034.1
Two-component system, NtrC family, nitrogen regulation response regulator NtrX.
 
      0.853
SDO18892.1
Urease accessory protein.
 
   
 0.831
SDO19055.1
Urease accessory protein.
 
   
 0.831
SDO18925.1
Urease accessory protein.
 
   
 0.798
SDO21154.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-).
  
 
 0.742
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.