STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO22109.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
SDO22042.1
Hypothetical protein.
 
     0.924
SDO22074.1
Biotin-(acetyl-CoA carboxylase) ligase.
 
     0.922
SDO22206.1
Formate dehydrogenase gamma subunit.
 
     0.856
SDO21872.1
Protein of unknown function.
 
     0.773
SDO21902.1
Protein of unknown function.
 
     0.768
SDO22373.1
Chaperone TorD involved in molybdoenzyme TorA maturation.
 
     0.753
SDO22178.1
Cytochrome c.
 
     0.742
SDO21939.1
Methyl-viologen-reducing hydrogenase, delta subunit.
 
     0.739
SDO22312.1
Formate dehydrogenase major subunit.
 
     0.687
SDO22012.1
Hypothetical protein.
       0.657
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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