STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO22373.1Chaperone TorD involved in molybdoenzyme TorA maturation. (206 aa)    
Predicted Functional Partners:
SDO21939.1
Methyl-viologen-reducing hydrogenase, delta subunit.
 
  
 0.874
SDO22270.1
Formate dehydrogenase beta subunit.
 
  
 0.865
SDO22312.1
Formate dehydrogenase major subunit.
 
   
 0.865
SDO22206.1
Formate dehydrogenase gamma subunit.
 
  
 0.848
SDO22042.1
Hypothetical protein.
 
     0.835
SDO22074.1
Biotin-(acetyl-CoA carboxylase) ligase.
 
     0.826
SDP64177.1
Formate dehydrogenase subunit gamma.
 
  
 0.818
SDO21902.1
Protein of unknown function.
 
    0.817
SDO21872.1
Protein of unknown function.
 
     0.814
SDP64202.1
Formate dehydrogenase iron-sulfur subunit.
 
  
 0.792
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.