STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO22872.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
SDP08433.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit.
  
 
 0.944
SDP08471.1
Ubiquinol-cytochrome c reductase cytochrome b subunit.
  
 
 0.938
SDO85695.1
Cytochrome c oxidase subunit 1.
  
   0.928
SDO85731.1
Cytochrome c oxidase subunit 2.
  
   0.927
SDO85543.1
Cytochrome c oxidase subunit 3.
  
   0.913
SDP19891.1
Cytochrome c oxidase cbb3-type subunit 3.
  
 
 0.882
SDO63265.1
Superoxide dismutase, Cu-Zn family.
    
   0.864
SDO12002.1
Protein SCO1/2.
 
   
 0.804
SDO14315.1
Cytochrome c.
   
   0.567
SDO25516.1
Cytochrome C oxidase, cbb3-type, subunit III; Manually curated.
   
   0.567
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.