STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO23821.1Tungstate transport system substrate-binding protein. (283 aa)    
Predicted Functional Partners:
SDO23740.1
Tungstate transport system permease protein.
 
  
 0.977
SDO23782.1
Tungstate transport system ATP-binding protein.
 
  
 0.957
SDO23855.1
DNA binding domain-containing protein, excisionase family.
 
     0.787
SDO23455.1
FdhD protein.
 
     0.714
SDP14962.1
iron(III) transport system ATP-binding protein.
    
 0.647
SDP19101.1
Molybdenum-pterin binding domain-containing protein.
    
 0.640
SDO67610.1
General L-amino acid transport system ATP-binding protein.
  
 
  0.599
SDO31847.1
Phosphate transport system ATP-binding protein.
    
 0.530
SDO10526.1
Putative ATP-binding cassette transporter.
    
  0.527
SDO95357.1
NAD-dependent formate dehydrogenase catalytic subunit/NAD-dependent formate dehydrogenase iron-sulfur protein.
 
     0.506
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.