STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO26611.1RND family efflux transporter, MFP subunit. (396 aa)    
Predicted Functional Partners:
SDO26638.1
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
  0.986
SDP14435.1
Outer membrane protein.
 
 0.947
SDO42339.1
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
 
  0.945
SDP48745.1
Hydrophobic/amphiphilic exporter-1, HAE1 family.
 
  0.945
SDO62966.1
Multidrug efflux pump.
 
  0.901
SDP48679.1
AcrB/AcrD/AcrF family protein.
 
  0.858
SDP50634.1
HlyD family secretion protein.
  
 
  0.833
SDO86197.1
HlyD family secretion protein.
  
  
  0.814
SDO27118.1
Multidrug resistance efflux pump.
  
  
  0.813
SDP48873.1
Multidrug efflux pump subunit AcrB.
 
  0.801
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.