STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO33957.1Release factor glutamine methyltransferase. (297 aa)    
Predicted Functional Partners:
SDO33999.1
Bacterial peptide chain release factor 1 (bRF-1).
 
 0.999
SDO04765.1
tRNA (guanine-N7-)-methyltransferase.
 
 
 
 0.883
SDO61932.1
Hypothetical protein.
    
 0.852
SDO73746.1
Translation factor SUA5.
 
  
 0.818
SDO38390.1
ATP synthase F1 subcomplex epsilon subunit.
 
 
   0.648
SDO84841.1
F-type H+-transporting ATPase subunit c.
  
   0.642
SDP15835.1
Phosphate:acyl-[acyl carrier protein] acyltransferase.
  
    0.640
SDO38563.1
ATP synthase F1 subcomplex delta subunit.
  
   0.623
SDO38502.1
F-type H+-transporting ATPase subunit gamma.
  
   0.606
SDO38543.1
ATP synthase F1 subcomplex alpha subunit.
  
   0.605
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.