STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO34971.1Uncharacterized zinc-type alcohol dehydrogenase-like protein. (333 aa)    
Predicted Functional Partners:
SDO89613.1
Aldehyde dehydrogenase.
  
 
 0.671
SDO02982.1
Vanillate O-demethylase ferredoxin subunit.
  
 
  0.657
SDP28068.1
Short chain enoyl-CoA hydratase.
  
 
 0.655
SDP07175.1
Methanesulfonate monooxygenase reductase component.
    
  0.649
SDP19891.1
Cytochrome c oxidase cbb3-type subunit 3.
   
 
  0.635
SDO35009.1
Protein of unknown function.
       0.596
SDO06196.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
 0.564
SDP42507.1
Alcohol dehydrogenase (cytochrome c).
   
 
  0.543
SDP43691.1
PQQ-dependent dehydrogenase, methanol/ethanol family.
   
 
  0.543
SDP47449.1
Methanol dehydrogenase (cytochrome) large subunit apoprotein.
   
 
  0.543
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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