STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO37868.1Protein TonB. (259 aa)    
Predicted Functional Partners:
SDO37830.1
Biopolymer transport protein TolR.
 
 
 0.944
SDO37779.1
Cell division and transport-associated protein TolQ (TC 2.C.1.2.1).
 
 
 0.928
SDO13381.1
Vitamin B12 transporter.
 
 
 
 0.919
SDO15374.1
Iron complex outermembrane recepter protein.
 
 
 0.866
SDO37740.1
Hypothetical protein.
 
     0.838
SDO10587.1
Iron complex outermembrane recepter protein.
 
 
 0.815
SDO30102.1
TonB-dependent Receptor Plug Domain.
 
 
 0.800
SDO33256.1
Iron complex outermembrane recepter protein.
  
 
 0.785
SDO16787.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
 
 
 0.776
SDO10557.1
Ferric iron reductase protein FhuF.
   
    0.748
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.