Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO15916.1 | SDO44355.1 | SAMN04488061_0440 | SAMN04488061_1196 | Hypothetical protein. | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | 0.900 |
SDO35752.1 | SDO44355.1 | SAMN04488061_0982 | SAMN04488061_1196 | TPR repeat-containing protein. | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | 0.908 |
SDO35752.1 | SDO62438.1 | SAMN04488061_0982 | SAMN04488061_1246 | TPR repeat-containing protein. | TPR repeat-containing protein. | 0.782 |
SDO35752.1 | SDO88078.1 | SAMN04488061_0982 | SAMN04488061_1902 | TPR repeat-containing protein. | TolB amino-terminal domain-containing protein. | 0.614 |
SDO35752.1 | SDP24632.1 | SAMN04488061_0982 | SAMN04488061_2615 | TPR repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.925 |
SDO35752.1 | SDP51489.1 | SAMN04488061_0982 | SAMN04488061_3252 | TPR repeat-containing protein. | alanyl-tRNA synthetase. | 0.966 |
SDO38269.1 | SDO44355.1 | SAMN04488061_1046 | SAMN04488061_1196 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | 0.859 |
SDO38269.1 | SDO62438.1 | SAMN04488061_1046 | SAMN04488061_1246 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | TPR repeat-containing protein. | 0.400 |
SDO44355.1 | SDO15916.1 | SAMN04488061_1196 | SAMN04488061_0440 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | Hypothetical protein. | 0.900 |
SDO44355.1 | SDO35752.1 | SAMN04488061_1196 | SAMN04488061_0982 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | TPR repeat-containing protein. | 0.908 |
SDO44355.1 | SDO38269.1 | SAMN04488061_1196 | SAMN04488061_1046 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.859 |
SDO44355.1 | SDO62438.1 | SAMN04488061_1196 | SAMN04488061_1246 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | TPR repeat-containing protein. | 0.955 |
SDO44355.1 | SDO88078.1 | SAMN04488061_1196 | SAMN04488061_1902 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | TolB amino-terminal domain-containing protein. | 0.930 |
SDO44355.1 | SDP21843.1 | SAMN04488061_1196 | SAMN04488061_2533 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | Tfp pilus assembly protein PilF. | 0.925 |
SDO44355.1 | SDP24632.1 | SAMN04488061_1196 | SAMN04488061_2615 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | Tetratricopeptide repeat-containing protein. | 0.934 |
SDO44355.1 | SDP46982.1 | SAMN04488061_1196 | SAMN04488061_3095 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | Hypothetical protein. | 0.891 |
SDO44355.1 | SDP51489.1 | SAMN04488061_1196 | SAMN04488061_3252 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | alanyl-tRNA synthetase. | 0.843 |
SDO44355.1 | SDP51539.1 | SAMN04488061_1196 | SAMN04488061_3254 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | Hypothetical protein. | 0.879 |
SDO62438.1 | SDO35752.1 | SAMN04488061_1246 | SAMN04488061_0982 | TPR repeat-containing protein. | TPR repeat-containing protein. | 0.782 |
SDO62438.1 | SDO38269.1 | SAMN04488061_1246 | SAMN04488061_1046 | TPR repeat-containing protein. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.400 |
page 1 of 4