STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO44707.1Thiamine biosynthesis lipoprotein. (364 aa)    
Predicted Functional Partners:
SDO44634.1
Hypothetical protein.
 
    0.970
SDO44672.1
Uncharacterized conserved protein, contains GH25 family domain.
 
    0.964
SDO44575.1
Hypothetical protein.
 
     0.930
SDO44528.1
Hypothetical protein.
       0.689
SDO44480.1
Catecholate siderophore receptor.
       0.531
SDO44747.1
PKHD-type hydroxylase.
       0.530
SDO07877.1
CxxC motif-containing protein, DUF1111 family.
   
    0.518
SDO26155.1
NAD(P)H-dependent nitrite reductase flavoprotein subunit.
 
  
 0.487
SDP07175.1
Methanesulfonate monooxygenase reductase component.
 
  
 0.439
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.