STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO45023.1NADPH:quinone reductase. (341 aa)    
Predicted Functional Partners:
SDO45066.1
NADPH:quinone reductase.
 
    
0.733
SDO37696.1
Hypothetical protein.
  
  
  0.728
SDP28203.1
Nodulation protein F.
   
 
 0.697
SDP62490.1
Acyl carrier protein.
   
 
 0.697
SDP07175.1
Methanesulfonate monooxygenase reductase component.
     
 0.629
SDP18191.1
NADPH2:quinone reductase.
 
    
0.621
SDP28068.1
Short chain enoyl-CoA hydratase.
  
 0.612
SDO09259.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
  0.491
SDO45108.1
Protein of unknown function.
  
    0.479
SDO14941.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
    
 0.475
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.