STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO63545.1Glucokinase. (311 aa)    
Predicted Functional Partners:
SDO72688.1
Glucose-6-phosphate isomerase.
    
 0.790
SDP14555.1
Dihydroxy-acid dehydratase.
  
 
 0.759
SDP49219.1
Phosphomannomutase / phosphoglucomutase.
     
 0.728
SDO63635.1
Trehalose 6-phosphatase.
 
     0.704
SDP25895.1
Transketolase.
    
 0.704
SDO63588.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
 
   
 0.695
SDO78092.1
GMP synthase (glutamine-hydrolyzing).
  
    0.688
SDO38633.1
Transaldolase.
    
 0.670
SDO65716.1
Fructokinase.
    
 0.593
SDP19891.1
Cytochrome c oxidase cbb3-type subunit 3.
     
 0.578
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.