STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO64708.1aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B. (499 aa)    
Predicted Functional Partners:
SDO15178.1
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
 0.999
SDO20651.1
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
 0.999
SDO64836.1
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A.
 0.999
SDO64880.1
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C.
 
 0.999
SDO82293.1
aspartyl-tRNA synthetase.
 
 0.999
SDO79131.1
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
 0.998
SDP57911.1
glutamyl-Q tRNA(Asp) synthetase.
 
 0.928
SDP22435.1
glutamyl-tRNA synthetase.
  
 0.926
SDP25241.1
glutamyl-tRNA synthetase.
  
 0.926
SDO78092.1
GMP synthase (glutamine-hydrolyzing).
  
  
 0.913
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.