STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO66906.1Fe-S cluster assembly protein SufD. (441 aa)    
Predicted Functional Partners:
SDO66952.1
Fe-S cluster assembly ATP-binding protein.
 0.999
SDO67031.1
Iron-regulated ABC transporter membrane component SufB.
0.999
SDO66860.1
Cysteine desulfurase.
 
 0.998
SDO66817.1
FeS assembly SUF system protein.
   
 0.975
SDP44894.1
Cysteine desulfuration protein SufE.
 
 0.872
SDP29709.1
NifU homolog involved in Fe-S cluster formation.
  
  
 0.863
SDO66775.1
Iron-sulfur cluster assembly protein.
  
 
 0.797
SDO23487.1
ATP-binding protein involved in chromosome partitioning.
 
   
 0.588
SDP27163.1
Monothiol glutaredoxin.
     
 0.556
SDP14682.1
Iron-sulfur cluster assembly accessory protein.
  
 
 0.525
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.