STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO68085.1N-terminal double-transmembrane domain-containing protein. (966 aa)    
Predicted Functional Partners:
SDO68034.1
Protein of unknown function DUF58.
 
    0.957
SDO68131.1
Hypothetical protein.
 
     0.956
SDO15885.1
Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily.
   
 0.952
SDO67988.1
MoxR-like ATPase.
 
     0.914
SDP58149.1
Methyltransferase domain-containing protein; Manually curated.
    
 0.900
SDP15443.1
Phytoene synthase.
 
 
 0.824
SDO30857.1
TIGR02302 family protein.
  
    0.775
SDO67937.1
Hypothetical protein.
 
     0.764
SDO07841.1
Cytochrome P450.
    
 0.750
SDO82821.1
Cytochrome P450.
    
 0.750
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.