Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO01540.1 | SDO14414.1 | SAMN04488061_0044 | SAMN04488061_0395 | Glutamate synthase (NADH) large subunit. | Acetyltransferase. | 0.459 |
SDO01540.1 | SDO27681.1 | SAMN04488061_0044 | SAMN04488061_0772 | Glutamate synthase (NADH) large subunit. | Glycine dehydrogenase. | 0.942 |
SDO01540.1 | SDO70964.1 | SAMN04488061_0044 | SAMN04488061_1449 | Glutamate synthase (NADH) large subunit. | Beta-alanine--pyruvate transaminase. | 0.894 |
SDO01540.1 | SDO78877.1 | SAMN04488061_0044 | SAMN04488061_1659 | Glutamate synthase (NADH) large subunit. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.830 |
SDO01540.1 | SDP12441.1 | SAMN04488061_0044 | SAMN04488061_2255 | Glutamate synthase (NADH) large subunit. | L-2,4-diaminobutyrate decarboxylase. | 0.934 |
SDO01540.1 | SDP28068.1 | SAMN04488061_0044 | SAMN04488061_2706 | Glutamate synthase (NADH) large subunit. | Short chain enoyl-CoA hydratase. | 0.437 |
SDO14414.1 | SDO01540.1 | SAMN04488061_0395 | SAMN04488061_0044 | Acetyltransferase. | Glutamate synthase (NADH) large subunit. | 0.459 |
SDO14414.1 | SDO70964.1 | SAMN04488061_0395 | SAMN04488061_1449 | Acetyltransferase. | Beta-alanine--pyruvate transaminase. | 0.700 |
SDO14414.1 | SDO78877.1 | SAMN04488061_0395 | SAMN04488061_1659 | Acetyltransferase. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.645 |
SDO14414.1 | SDP12441.1 | SAMN04488061_0395 | SAMN04488061_2255 | Acetyltransferase. | L-2,4-diaminobutyrate decarboxylase. | 0.531 |
SDO14414.1 | SDP28068.1 | SAMN04488061_0395 | SAMN04488061_2706 | Acetyltransferase. | Short chain enoyl-CoA hydratase. | 0.899 |
SDO27681.1 | SDO01540.1 | SAMN04488061_0772 | SAMN04488061_0044 | Glycine dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.942 |
SDO27681.1 | SDO70964.1 | SAMN04488061_0772 | SAMN04488061_1449 | Glycine dehydrogenase. | Beta-alanine--pyruvate transaminase. | 0.715 |
SDO27681.1 | SDO78877.1 | SAMN04488061_0772 | SAMN04488061_1659 | Glycine dehydrogenase. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.784 |
SDO27681.1 | SDP12441.1 | SAMN04488061_0772 | SAMN04488061_2255 | Glycine dehydrogenase. | L-2,4-diaminobutyrate decarboxylase. | 0.892 |
SDO27681.1 | SDP28068.1 | SAMN04488061_0772 | SAMN04488061_2706 | Glycine dehydrogenase. | Short chain enoyl-CoA hydratase. | 0.454 |
SDO27681.1 | SDP55785.1 | SAMN04488061_0772 | SAMN04488061_3307 | Glycine dehydrogenase. | 8-amino-7-oxononanoate synthase. | 0.816 |
SDO27681.1 | SDP55806.1 | SAMN04488061_0772 | SAMN04488061_3308 | Glycine dehydrogenase. | Biotin synthase. | 0.428 |
SDO66431.1 | SDO70964.1 | SAMN04488061_1339 | SAMN04488061_1449 | Pantoate--beta-alanine ligase. | Beta-alanine--pyruvate transaminase. | 0.688 |
SDO66431.1 | SDP12441.1 | SAMN04488061_1339 | SAMN04488061_2255 | Pantoate--beta-alanine ligase. | L-2,4-diaminobutyrate decarboxylase. | 0.728 |
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