STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO71393.1ATP phosphoribosyltransferase. (239 aa)    
Predicted Functional Partners:
SDO71442.1
ATP phosphoribosyltransferase regulatory subunit.
 0.999
SDO41518.1
phosphoribosyl-ATP pyrophosphatase.
 
 
 0.997
SDO10827.1
Histidinol dehydrogenase.
 
 
 0.996
SDO25069.1
Cyclase.
 
 
 0.996
SDP29679.1
phosphoribosyl-AMP cyclohydrolase.
 
 
 0.996
SDO71483.1
histidyl-tRNA synthetase.
 
 0.995
SDO25178.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.
 
 
 0.994
SDO25287.1
Glutamine amidotransferase.
 
  
 0.992
SDO25343.1
Imidazoleglycerol-phosphate dehydratase.
 
  
 0.992
SDO05839.1
Histidinol-phosphate aminotransferase.
 
  
 0.981
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.