STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO78168.1Pimeloyl-ACP methyl ester carboxylesterase. (314 aa)    
Predicted Functional Partners:
SDP65004.1
SSU ribosomal protein S10P.
    
  0.798
SDO06237.1
Dihydrolipoamide dehydrogenase.
     
 0.795
SDP62552.1
SSU ribosomal protein S6P.
   
 
  0.794
SDP24728.1
SSU ribosomal protein S2P.
   
 
  0.792
SDP07953.1
Superoxide dismutase, Fe-Mn family.
    
  0.789
SDP65187.1
SSU ribosomal protein S17P.
   
 
  0.774
SDO37467.1
N-methylglutamate dehydrogenase subunit C.
   
 0.769
SDO91496.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.764
SDP48137.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.764
SDP28068.1
Short chain enoyl-CoA hydratase.
  
 
 0.763
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.