STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO78804.1Tripartite tricarboxylate transporter TctB family protein. (165 aa)    
Predicted Functional Partners:
SDO78771.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
  
 0.794
SDO78844.1
Putative tricarboxylic transport membrane protein.
  
 
 0.785
SDO13635.1
Putative tricarboxylic transport membrane protein.
  
 
 0.543
SDP43848.1
Putative tricarboxylic transport membrane protein.
  
 
 0.543
SDP47964.1
Putative tricarboxylic transport membrane protein.
  
 
 0.543
SDO13668.1
Putative tricarboxylic transport membrane protein.
  
 
 0.532
SDO13597.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
  
 0.510
SDO94850.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
  
 0.510
SDP43820.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
  
 0.510
SDP48017.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
  
 0.510
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.