STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO80808.1UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase. (374 aa)    
Predicted Functional Partners:
SDO80873.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
 
 
 0.999
SDO80749.1
UDP-N-acetylmuramate--L-alanine ligase.
 
 0.996
SDO80912.1
Phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
 
 0.996
SDO80841.1
Cell division protein FtsW.
  
 0.994
SDO80952.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase.
 
 
 0.993
SDO80648.1
Cell division protein FtsQ.
  
  
 0.982
SDO80679.1
D-alanine-D-alanine ligase.
 
  
 0.981
SDO80988.1
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
 
 0.980
SDO80572.1
Cell division protein FtsZ.
 
 0.954
SDO10483.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.950
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.