STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO87929.1Glyoxylase, beta-lactamase superfamily II. (311 aa)    
Predicted Functional Partners:
SDO87986.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 
  0.716
SDO88049.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
 
     0.706
SDO37467.1
N-methylglutamate dehydrogenase subunit C.
  
 
  0.672
SDO77702.1
Cupin domain protein.
  
     0.660
SDO91496.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.650
SDP48137.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.650
SDO87861.1
NADH dehydrogenase; Manually curated.
 
     0.632
SDP07175.1
Methanesulfonate monooxygenase reductase component.
     
 0.606
SDO87958.1
Transcriptional regulator, AraC family.
 
     0.568
SDO88078.1
TolB amino-terminal domain-containing protein.
 
     0.541
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.