STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO89294.1Lipid-binding SYLF domain-containing protein. (183 aa)    
Predicted Functional Partners:
SDP11043.1
Uncharacterized conserved protein YjbJ, UPF0337 family.
  
    0.785
SDP10634.1
Uncharacterized membrane protein YtjA, UPF0391 family.
   
    0.640
SDP51025.1
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
   
    0.588
SDP63973.1
Protein of unknwon function.
   
  
 0.571
SDO83286.1
Hypothetical protein.
   
    0.541
SDO89264.1
Putative DNA-binding domain-containing protein.
       0.461
SDO06424.1
ABC transporter.
   
    0.456
SDO23116.1
Ala-tRNA(Pro) deacylase.
  
     0.401
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.