STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO89971.1ABC-2 type transport system permease protein. (387 aa)    
Predicted Functional Partners:
SDO90012.1
ABC-2 type transport system ATP-binding protein.
 
  0.999
SDP06842.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.986
SDP42695.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.986
SDO43679.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.985
SDO21416.1
Lipopolysaccharide export system ATP-binding protein.
   
  0.981
SDO81894.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
   
  0.979
SDO90051.1
HlyD family secretion protein.
  
 0.972
SDP14962.1
iron(III) transport system ATP-binding protein.
 
   
  0.929
SDO18594.1
ABC-2 type transport system permease protein.
 
  
 
0.886
SDP27707.1
Branched-chain amino acid transport system ATP-binding protein.
 
   
  0.886
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.