STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO92089.1Glycosyl transferase family 2. (294 aa)    
Predicted Functional Partners:
SDP63167.1
Glycosyl transferase family 2.
  
     0.769
SDO92417.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.766
SDP63143.1
Glycosyl transferase family 2.
  
     0.766
SDP63239.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.761
SDO10483.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
 
 0.672
SDP17463.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.649
SDO11600.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.572
SDO92140.1
3'(2'),5'-bisphosphate nucleotidase.
       0.572
SDO92232.1
GDPmannose 4,6-dehydratase.
  
 
  0.496
SDO28732.1
CDP-paratose 2-epimerase.
 
 
 0.429
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.