STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO92417.1Glycosyltransferase involved in cell wall bisynthesis. (296 aa)    
Predicted Functional Partners:
SDO91996.1
Methyltransferase, FkbM family.
  
 
  0.781
SDO92089.1
Glycosyl transferase family 2.
  
     0.766
SDP17463.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.701
SDO11600.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.627
SDO10483.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.616
SDO92469.1
Rare lipoprotein A; Manually curated.
 
     0.483
SDO28732.1
CDP-paratose 2-epimerase.
 
 
 0.450
SDO01686.1
UDP-galactose 4-epimerase.
 
   
 0.433
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.