STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP06904.1NitT/TauT family transport system ATP-binding protein. (295 aa)    
Predicted Functional Partners:
SDP06943.1
NitT/TauT family transport system permease protein.
 
 0.975
SDP07003.1
NitT/TauT family transport system permease protein.
 
  0.969
SDO26004.1
Nitrate/nitrite transport system substrate-binding protein.
 
 0.964
SDO25974.1
NitT/TauT family transport system ATP-binding protein.
 
 0.958
SDP07032.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.937
SDO03432.1
Nitrate/nitrite transport system permease protein.
 
  0.932
SDO26039.1
Nitrate/nitrite transport system permease protein.
 
  0.895
SDP06842.1
ABC-2 type transport system ATP-binding protein.
 
  
 
0.875
SDO18532.1
Ribosome-dependent ATPase.
   
 
0.856
SDO67470.1
General L-amino acid transport system permease protein.
 
   
  0.822
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.