STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP08708.1Adenine phosphoribosyltransferase. (176 aa)    
Predicted Functional Partners:
SDP08553.1
Methylthioadenosine phosphorylase.
 
 0.984
SDO78092.1
GMP synthase (glutamine-hydrolyzing).
  
 0.979
SDP62397.1
Guanylate kinase.
  
 
 0.914
SDO36397.1
Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase.
  
 0.890
SDP27505.1
Adenylosuccinate lyase.
  
 0.880
SDP08783.1
Methylthioribose-1-phosphate isomerase.
 
    0.863
SDO78313.1
IMP dehydrogenase.
  
 
 0.842
SDP65417.1
Adenylate kinase.
  
 
 0.840
SDO22482.1
Hypoxanthine phosphoribosyltransferase.
   
 0.828
SDO16600.1
Na+/proline symporter.
  
  
 0.807
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.